Single-Cell Analysis Platform
The Genomics Core Facility offers a wide variety of single-cell sequencing workflows to study heterogeneity within the epigenome, genome, transcriptome, and proteome at a single-cell resolution. Services are provided using the 10x Genomics Chromium and the BD Rhapsody platform.
- Single-cell 5' & 3’ RNA sequencing: provides quantitative analysis of the whole transcriptome or targeted gene panels using the Chromium or Rhapsody system
- Single-cell immune profiling: sequencing of the full V(D)J region for quantitative -cell and B-cell characterization (Chromium & Rhapsody)
- Single Cell ATAC: (Assay for Transposase Accessible Chromatin): allows chromatin accessibility profiling of tens of thousands of single cells in parallel
- Single-cell multiome: Simultaneously profile gene expression and open chromatin from the same cell with Chromium Single Cell Multiome ATAC + Gene Expression.
- Single-cell feature barcoding: Detection of surface protein expression and cell barcoding at the single-cell level.
We are working to establish additional applications: Single nuclei RNA-Seq.
Contact us for additional information or information meeting
News
The Genomics Core Facility will not accept new sample submissions over the summer break. The deadline for submission is noon on Friday, July 5th. We will reopen on Tuesday, July 30th. The sequencing of existing projects will continue, although turnaround times may be longer than usual.
We wish all our users a good summer
The First Visium HD service was performed this week. High demand for this new technology to study spatial biology at single–cell–scale resolution.
Contact Information:
Genomics-Core@ous-research.no
Daily Leader Core Facility
Susanne Lorenz, PhD
Susanne.Lorenz@ous-research.no
Head of Core Facility
Leonardo A. Meza-Zepeda, Dr. philos.
L.A.Meza-Zepeda@ous-research.no
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Visiting address:
Genomics Core Facility (Room 3-F8-04)
Department of Core facilities
Institute for Cancer Research
New OCCI-building
Norwegian Radium Hospital
Ullernchaussen 66, Lamell 3, 2B
NO-0379 Oslo, NORWAY
+47 - 9183 2772 Laboratory
+47 - 9183 3425 Office
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