Spatial Transcriptomics

Spatial Transcriptomics is a molecular profiling method to determine the cellular localization of mRNA molecules on a tissue section. This was chosen as the method of the year by Nature magazine in 2020.
 
The Genomics Core Facility has established NanoString’s GeoMx Digital Spatial Profiler technology as a service and is currently working on establishing the 10x Genomics Visium technology. 
 
The NanoString’s GeoMx Digital Spatial Profiler (DSP) combines spatial and molecular profiling technologies by generating whole digital transcriptomes and profiling data for 100s of validated Protein analytes. This unique combination of high-plex and high-throughput spatial profiling enables researchers to rapidly and quantitatively assess the biological implications of the heterogeneity within tissue samples. For more information about DSP applications please visit this NanoString website.
 

Technology Overview

 

Example from our services

Morphology marker PanCK (green), CD45 (grey), SYTO13 (blue) & Vimentin (red) Morphology on a gastrointestinal stromal tumour.

 
 
 
 


News

Jan 4, 2023

The Genomics and Bioinformatics Core Facilities resumes the drop-in hour every Wednesday between  2:30-3:30 PM. Follow the Zoom link below.

Oct 25, 2022
The Oslo University Hospital and University of Oslo Genomics Core Facility in collaboration with 10x Genomics will launch the new multiomics platform established in Norway.


Contact Information:

Genomics@rr-research.no

Unit Leader Core Facility
Susanne Lorenz, PhD

Susanne.Lorenz@rr-research.no

Head of Core Facility
Leonardo A. Meza-Zepeda, Dr. philos.

Leonardo.A.Meza-Zepeda@rr-research.no

Follow us via Twitter

@OSLOmicsCore

Visiting address:

Genomics Core Facility (Room 3-F8-04)
Department of Core facilities
Institute for Cancer Research
New OCCI-building 
 
Norwegian Radium Hospital 
Ullernchaussen 66, Lamell 3, 2B 
NO-0379 Oslo, NORWAY

+47 - 9183 2772 Laboratory
+47 - 9183 3425 Office

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